Protein ZmOrphan27
ZmOrphan27 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan27
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym):
Uniprot ID: B4F936
Subgenome: 2

Protein ZmOrphan27

ZmOrphan27 is a protein in the Orphans family.

Overview of domains present in v5 transcripts
PF00481PF07228
Zm00001eb400570_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d048131DAPseq no logo sequence fimo position
Zm00001d048131DAPseq no logo sequence fimo position
Zm00001d048131ChIPseq no logo sequence fimo position
Zm00001d048131PChIPseq no logo sequence fimo position

Interactions where ZmOrphan27 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan27 is the target  
Expand


There are 267 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb400570_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MRGLSRYLPFCGGGCCCGDGAGRAGGVADGLVWDVALKAHASGDYSIAVAQANEALEDQAQVVAAPAATLVGVFDGHGGP
EAARFVNRRLFSHIQAFAAENGGLSAEVFQKAFGATEEEFIGLVQKSWPSQPRIVSVGSCCLVGAVDIENGTLYVANLGD
SRAVLGRRRGKGRRVVAERLSQDHNVADEGVRREVAEMHPDDSHIVLNSHGVWRIKGIIQVSRSIGDVYLKKPDICRGNP
VLQQSICPFPLRRPVMTAVPSITTRELRPGDRFIIFASDGLWEQLSDDAAVDVVASSPRKGVAMRLVRAAQLEAARKKEV
KYDKIRTIEKGQRRHFHDDITVVVLFLDKCRGAARSGPEDIDGTYAPVDVFSCSPAAGGDHEDPTKPVLRR

MRGLSRYLPFCGGGCCCGDGAGRAGGVADGLVWDVALKAHASGDYSIAVAQANEALEDQAQVVAAPAATLVGVFDGHGGP
EAARFVNRRLFSHIQAFAAENGGLSAEVFQKAFGATEEEFIGLVQKSWPSQPRIVSVGSCCLVGAVDIENGTLYVANLGD
SRAVLGRRRGKGRRVVAERLSQDHNVADEGVRREVAEMHPDDSHIVLNSHGVWRIKGIIQVSRSIGDVYLKKPDICRGNP
VLQQSICPFPLRRPVMTAVPSITTRELRPGDRFIIFASDGLWEQLSDDAAVDVVASSPRKGVAMRLVRAAQLEAARKKEV
KYDKIRTIEKGQRRHFHDDITVVVLFLDKCRGAARSGPEDIDGTYAPVDVFSCSPAAGGDHEDPTKPVLRR

MRGLSRYLPFCGGGCCCGDGAGRAGGVADGLVWDVALKAHASGDYSIAVAQANEALEDQAQVVAAPAATLVGVFDGHGGP
EAARFVNRRLFSHIQAFAAENGGLSAEVFQKAFGATEEEFIGLVQKSWPSQPRIVSVGSCCLVGAVDIENGTLYVANLGD
SRAVLGRRRGKGRRVVAERLSQDHNVADEGVRREVAEMHPDDSHIVLNSHGVWRIKGIIQVSRSIGDVYLKKPDICRGNP
VLQQSICPFPLRRPVMTAVPSITTRELRPGDRFIIFASDGLWEQLSDDAAVDVVASSPRKGVAMRLVRAAQLEAARKKEV
KYDKIRTIEKGQRRHFHDDITVVVLFLDKCRGAARSGPEDIDGTYAPVDVFSCSPAAGGDHEDPTKPVLRR

MRGLSRYLPFCGGGCCCGDGAGRAGGVADGLVWDVALKAHASGDYSIAVAQANEALEDQAQVVAAPAATLVGVFDGHGGP
EAARFVNRRLFSHIQAFAAENGGLSAEVFQKAFGATEEEFIGLVQKSWPSQPRIVSVGSCCLVGAVDIENGTLYVANLGD
SRAVLGRRRGKGRRVVAERLSQDHNVADEGVRREVAEMHPDDSHIVLNSHGVWRIKGIIQVSRSIGDVYLKKPDICRGNP
VLQQSICPFPLRRPVMTAVPSITTRELRPGDRFIIFASDGLWEQLSDDAAVDVVASSPRKGVAMRLVRAAQLEAARKKEV
KYDKIRTIEKGQRRHFHDDITVVVLFLDKCRGAARSGPEDIDGTYAPVDVFSCSPAAGGDHEDPTKPVLRR

MRGLSRYLPFCGGGCCCGDGAGRAGGVADGLVWDVALKAHASGDYSIAVAQANEALEDQAQVVAAPAATLVGVFDGHGGP
EAARFVNRRLFSHIQAFAAENGGLSAEVFQKAFGATEEEFIGLVQKSWPSQPRIVSVGSCCLVGAVDIENGTLYVANLGD
SRAVLGRRRGKGRRVVAERLSQDHNVADEGVRREVAEMHPDDSHIVLNSHGVWRIKGIIQVSRSIGDVYLKKPDICRGNP
VLQQSICPFPLRRPVMTAVPSITTRELRPGDRFIIFASDGLWEQLSDDAAVDVVASSPRKGVAMRLVRAAQLEAARKKEV
KYDKIRTIEKGQRRHFHDDITVVVLFLDKCRGAARSGPEDIDGTYAPVDVFSCSPAAGGDHEDPTKPVLRR

MRGLSRYLPFCGGGCCCGDGAGRAGGVADGLVWDVALKAHASGDYSIAVAQANEALEDQAQVVAAPAATLVGVFDGHGGP
EAARFVNRRLFSHIQAFAAENGGLSAEVFQKAFGATEEEFIGLVQKSWPSQPRIVSVGSCCLVGAVDIENGTLYVANLGD
SRAVLGRRRGKGRRVVAERLSQDHNVADEGVRREVAEMHPDDSHIVLNSHGVWRIKGIIQVSRSIGDVYLKKPDICRGNP
VLQQSICPFPLRRPVMTAVPSITTRELRPGDRFIIFASDGLWEQLSDDAAVDVVASSPRKGVAMRLVRAAQLEAARKKEV
KYDKIRTIEKGQRRHFHDDITVVVLFLDKCRGAARSGPEDIDGTYAPVDVFSCSPAAGGDHEDPTKPVLRR

MRGLSRYLPFCGGGCCCGDGAGRAGGVADGLVWDVALKAHASGDYSIAVAQANEALEDQAQVVAAPAATLVGVFDGHGGP
EAARFVNRRLFSHIQAFAAENGGLSAEVFQKAFGATEEEFIGLVQKSWPSQPRIVSVGSCCLVGAVDIENGTLYVANLGD
SRAVLGRRRGKGRRVVAERLSQDHNVADEGVRREVAEMHPDDSHIVLNSHGVWRIKGIIQVSRSIGDVYLKKPDICRGNP
VLQQSICPFPLRRPVMTAVPSITTRELRPGDRFIIFASDGLWEQLSDDAAVDVVASSPRKGVAMRLVRAAQLEAARKKEV
KYDKIRTIEKGQRRHFHDDITVVVLFLDKCRGAARSGPEDIDGTYAPVDVFSCSPAAGGDHEDPTKPVLRR

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00481
PF07228
PF07228
Hover here to show all domains

Nucleotide Sequence
Copy to clipboard
     
Expand

GGTTTCTTCTCTGTCAGTATACGCT...

GRMZM2G130943_T01 from maize genome v3

Amino Acid Sequence
Copy to clipboard

MGPWGCGWGICMRPRAAAKAANRRKSVTAGTTEKNASSSSSQCPPVVPCSLCPPVNTRRNGRLPWRLPIHDRHTPSSKHF
FHLHTTPRQSEREQPRQNPRGRLSLDRRAAATRAHNTAGEFKASESVVGVLVLAMRGLSRYLPFCGGGCCCGDGAGRAGG
VADGLVWDVALKAHASGDYSIAVAQANEALEDQAQVVAAPAATLVGVFDGHGGPEAARFVNRRLFSHIQGELCWRY

Nucleotide Sequence
Copy to clipboard
     
Expand

GGGAATGGAGATGGATAGCTGAAGA...

GRMZM2G130943_T02 from maize genome v3


Related TFome: pUT6030

Amino Acid Sequence
Copy to clipboard

MRGLSRYLPFCGGGCCCGDGAGRAGGVADGLVWDVALKAHASGDYSIAVAQANEALEDQAQVVAAPAATLVGVFDGHGGP
EAARFVNRRLFSHIQAFAAENGGLSAEVFQKAFGATEEEFIGLVQKSWPSQPRIVSVGSCCLVGAVDIENGTLYVANLGD
SRAVLGRRRGKGRRVVAERLSQDHNVADEGVRREVAEMHPDDSHIVLNSHGVWRIKGIIQVSRSIGDVYLKKPDICRGNP
VLQQSICPFPLRRPVMTAVPSITTRELRPGDRFIIFASDGLWEQLSDDAAVDVVASSPRKGVAMRLVRAAQLEAARKKEV
KYDKIRTIEKGQRRHFHDDITVVVLFLDKCRGAARSGPEDIDGTYAPVDVFSCSPAAGGDHEDPTKPVLRR

Nucleotide Sequence
Copy to clipboard
     
Expand

ACTTCTTCCACTTGCACACCACGCC...

Zm00001d048131_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MRGLSRYLPFCGGGCCCGDGAGRAGGVADGLVWDVALKAHASGDYSIAVAQANEALEDQAQVVAAPAATLVGVFDGHGGP
EAARFVNRRLFSHIQAFAAENGGLSAEVFQKAFGATEEEFIGLVQKSWPSQPRIVSVGSCCLVGAVDIENGTLYVANLGD
SRAVLGRRRGKGRRVVAERLSQDHNVADEGVRREVAEMHPDDSHIVLNSHGVWRIKGIIQVSRSIGDVYLKKPDICRGNP
VLQQSICPFPLRRPVMTAVPSITTRELRPGDRFIIFASDGLWEQLSDDAAVDVVASSPRKGVAMRLVRAAQLEAARKKEV
KYDKIRTIEKGQRRHFHDDITVVVLFLDKCRGAARSGPEDIDGTYAPVDVFSCSPAAGGDHEDPTKPVLRR

Nucleotide Sequence
Copy to clipboard
     
Expand

CACGCCCCGACAAAGCGAGCGAGAG...


Copyright © 2023 Grassius.org | Last updated: 2023-06-26